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    L3HYPDH trans-L-3-hydroxyproline dehydratase [ Athene cunicularia (burrowing owl) ]

    Gene ID: 113480427, updated on 3-Aug-2024

    Summary

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    Gene symbol
    L3HYPDH
    Gene description
    trans-L-3-hydroxyproline dehydratase
    See related
    Ensembl:ENSACUG00000003245
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Athene cunicularia
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See L3HYPDH in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current athCun1 (GCF_003259725.1) 5 Unlocalized Scaffold NW_020799101.1 (9601499..9604635)

    NW_020799101.1Genomic Context describing neighboring genes Neighboring gene reticulon 1 Neighboring gene JNK1/MAPK8 associated membrane protein Neighboring gene G protein-coupled receptor 135 Neighboring gene dishevelled associated activator of morphogenesis 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020799101 Chromosome 5 Unlocalized Scaffold Reference athCun1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydro-lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trans-3-hydroxy-L-proline dehydratase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference athCun1

    Genomic

    1. NW_020799101.1 Reference athCun1

      Range
      9601499..9604635
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026849225.1 → XP_026705026.1  trans-3-hydroxy-L-proline dehydratase

      UniProtKB/TrEMBL
      A0A663LZ64
      Related
      ENSACUP00000004772.1, ENSACUT00000005091.1
      Conserved Domains (1) summary
      cl27019
      Location:1 → 246
      Pro_racemase; Proline racemase
    Nucleotide Protein
    Heading Accession and Version

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