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    AGRN agrin [ Notechis scutatus (mainland tiger snake) ]

    Gene ID: 113421268, updated on 15-Mar-2024

    Summary

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    Gene symbol
    AGRN
    Gene description
    agrin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Notechis scutatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Elapidae; Acanthophiinae; Notechis
    Orthologs
    human mouse all
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    Genomic context

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    See AGRN in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    100 current TS10Xv2-PRI (GCF_900518725.1) Unplaced Scaffold NW_020716768.1 (1277121..1361050, complement)

    NW_020716768.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 11 Neighboring gene tyrosine-protein phosphatase non-receptor type 11-like Neighboring gene ring finger protein 223 Neighboring gene hes family bHLH transcription factor 4 Neighboring gene PPARGC1 and ESRR induced regulator, muscle 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020716768 Unplaced Scaffold Reference TS10Xv2-PRI

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    agrin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Notechis scutatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TS10Xv2-PRI

    Genomic

    1. NW_020716768.1 Reference TS10Xv2-PRI

      Range
      1277121..1361050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026681557.1 → XP_026537342.1  agrin

      UniProtKB/TrEMBL
      A0A6J1V263
    Nucleotide Protein
    Heading Accession and Version

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