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    LOC113122827 IgGFc-binding protein-like [ Mastacembelus armatus (zig-zag eel) ]

    Gene ID: 113122827, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC113122827
    Gene description
    IgGFc-binding protein-like
    See related
    Ensembl:ENSMAMG00000025006
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mastacembelus armatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
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    Genomic context

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    See LOC113122827 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    101 current fMasArm1.2 (GCF_900324485.2) 16 NC_046648.1 (1095699..1110660, complement)
    100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535965.1 (13823093..13838054, complement)

    Chromosome 16 - NC_046648.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113122825 Neighboring gene IgGFc-binding protein-like Neighboring gene uncharacterized LOC113122828 Neighboring gene IgGFc-binding protein-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    IgGFc-binding protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fMasArm1.2 Primary Assembly

    Genomic

    1. NC_046648.1 Reference fMasArm1.2 Primary Assembly

      Range
      1095699..1110660 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026294434.1 → XP_026150219.1  IgGFc-binding protein-like

      UniProtKB/TrEMBL
      A0A3Q3M7P2
      Related
      ENSMAMP00000023295.2, ENSMAMT00000023892.2
      Conserved Domains (6) summary
      smart00216
      Location:454 → 623
      VWD; von Willebrand factor (vWF) type D domain
      smart00832
      Location:1055 → 1130
      C8; This domain contains 8 conserved cysteine residues
      pfam00094
      Location:2060 → 2215
      VWD; von Willebrand factor type D domain
      pfam01826
      Location:744 → 797
      TIL; Trypsin Inhibitor like cysteine rich domain
      cl02516
      Location:2828 → 2986
      VWD; von Willebrand factor type D domain
      cl17735
      Location:2387 → 2441
      VWC; von Willebrand factor type C domain
    Nucleotide Protein
    Heading Accession and Version

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