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    LOC113000479 WAT1-related protein At1g21890 [ Glycine max (soybean) ]

    Gene ID: 113000479, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC113000479
    Gene description
    WAT1-related protein At1g21890
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC113000479 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 2 NC_016089.4 (31147916..31148623, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 2 NC_016089.3 (29256961..29257674, complement)

    Chromosome 2 - NC_016089.4Genomic Context describing neighboring genes Neighboring gene G patch domain-containing protein 11 Neighboring gene uncharacterized LOC102665185 Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WAT1-related protein At1g21890

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016089.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      31147916..31148623 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026127216.2 → XP_025983001.1  WAT1-related protein At1g21890

      UniProtKB/TrEMBL
      K7K9A4, K7MMZ0
      Conserved Domains (1) summary
      PLN00411
      Location:11 → 119
      PLN00411; nodulin MtN21 family protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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