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    SDCBP2 syndecan binding protein 2 [ Vulpes vulpes (red fox) ]

    Gene ID: 112909927, updated on 15-Mar-2024

    Summary

    Gene symbol
    SDCBP2
    Gene description
    syndecan binding protein 2
    See related
    Ensembl:ENSVVUG00000008038
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vulpes vulpes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
    Orthologs
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    Genomic context

    See SDCBP2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356652.1 (308014..318747)

    NW_020356652.1Genomic Context describing neighboring genes Neighboring gene NSFL1 cofactor Neighboring gene FKBP prolyl isomerase 1A Neighboring gene syntaphilin Neighboring gene RAD21 cohesin complex component like 1 Neighboring gene chromosome unknown C20orf202 homolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_020356652 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference VulVul2.2 Primary Assembly

    Genomic

    1. NW_020356652.1 Reference VulVul2.2 Primary Assembly

      Range
      308014..318747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025986119.1XP_025841904.1  syntenin-2

      UniProtKB/TrEMBL
      A0A3Q7R6Z8
      Related
      ENSVVUP00000010886.1, ENSVVUT00000014277.1
      Conserved Domains (1) summary
      cd00992
      Location:101180
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...