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    RIN2 Ras and Rab interactor 2 [ Canis lupus dingo (dingo) ]

    Gene ID: 112673512, updated on 10-Oct-2024

    Summary

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    Gene symbol
    RIN2
    Gene description
    Ras and Rab interactor 2
    See related
    Ensembl:ENSCAFG00020027491
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus dingo (sub-species: dingo)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See RIN2 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    102 current ASM325472v2 (GCF_003254725.2) 24 NC_064266.1 (3471499..3689920, complement)
    101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 24 Unlocalized Scaffold NW_023365209.1 (3717613..3936353, complement)

    Chromosome 24 - NC_064266.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein 3-like Neighboring gene N-alpha-acetyltransferase 20, NatB catalytic subunit Neighboring gene uncharacterized LOC112673513 Neighboring gene solute carrier family 24 member 3 Neighboring gene uncharacterized LOC118352249 Neighboring gene uncharacterized LOC112673519

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras and Rab interactor 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM325472v2

    Genomic

    1. NC_064266.1 Reference ASM325472v2

      Range
      3471499..3689920 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025469145.3 → XP_025324930.1  ras and Rab interactor 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0LZ64, A0A8C0Z5S2
      Related
      ENSCAFP00020035501.1
      Conserved Domains (3) summary
      smart00167
      Location:661 → 779
      VPS9; Domain present in VPS9
      cd10394
      Location:86 → 185
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:800 → 890
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    2. XM_025469144.3 → XP_025324929.1  ras and Rab interactor 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0Z5S2
      Conserved Domains (3) summary
      smart00167
      Location:692 → 810
      VPS9; Domain present in VPS9
      cd10394
      Location:117 → 216
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:831 → 921
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    3. XM_049100279.1 → XP_048956236.1  ras and Rab interactor 2 isoform X1

    4. XM_025469150.3 → XP_025324935.1  ras and Rab interactor 2 isoform X8

      UniProtKB/TrEMBL
      A0A8C0TLN7
      Conserved Domains (3) summary
      smart00167
      Location:608 → 726
      VPS9; Domain present in VPS9
      cd10394
      Location:33 → 132
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:747 → 837
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    5. XM_035705886.2 → XP_035561779.1  ras and Rab interactor 2 isoform X8

      UniProtKB/TrEMBL
      A0A8C0TLN7
      Conserved Domains (3) summary
      smart00167
      Location:608 → 726
      VPS9; Domain present in VPS9
      cd10394
      Location:33 → 132
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:747 → 837
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    6. XM_035705884.2 → XP_035561777.1  ras and Rab interactor 2 isoform X5

      UniProtKB/TrEMBL
      A0A8C0TNS3
      Conserved Domains (3) summary
      smart00167
      Location:593 → 711
      VPS9; Domain present in VPS9
      cd16131
      Location:732 → 822
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)
      cl15255
      Location:86 → 119
      SH2; Src homology 2 (SH2) domain

    7. XM_035705883.2 → XP_035561776.1  ras and Rab interactor 2 isoform X4

      UniProtKB/TrEMBL
      A0A8C0TNS3
      Conserved Domains (3) summary
      smart00167
      Location:612 → 730
      VPS9; Domain present in VPS9
      cd16131
      Location:751 → 841
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)
      cl15255
      Location:86 → 179
      SH2; Src homology 2 (SH2) domain

    8. XM_025469149.3 → XP_025324934.1  ras and Rab interactor 2 isoform X7

      UniProtKB/TrEMBL
      A0A8C0LV04, A0A8C0TLN7, A0A8C0TNT8
      Related
      ENSCAFP00020035503.1
      Conserved Domains (3) summary
      smart00167
      Location:616 → 734
      VPS9; Domain present in VPS9
      cd10394
      Location:41 → 140
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:755 → 845
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    9. XM_049100281.1 → XP_048956238.1  ras and Rab interactor 2 isoform X7

      UniProtKB/TrEMBL
      A0A8C0LV04, A0A8C0TNT8

    10. XM_025469148.3 → XP_025324933.1  ras and Rab interactor 2 isoform X6

      UniProtKB/TrEMBL
      A0A8C0TLN7, A0A8I3QJ40
      Conserved Domains (3) summary
      smart00167
      Location:627 → 745
      VPS9; Domain present in VPS9
      cd10394
      Location:52 → 151
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:766 → 856
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    11. XM_049100280.1 → XP_048956237.1  ras and Rab interactor 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0TSC2, A0A8I3S732
    Nucleotide Protein
    Heading Accession and Version

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