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    LOC112422159 uncharacterized LOC112422159 [ Medicago truncatula (barrel medic) ]

    Gene ID: 112422159, updated on 1-Mar-2021

    Summary

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    Gene symbol
    LOC112422159
    Gene description
    uncharacterized LOC112422159
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC112422159 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 5 NC_053046.1 (33311607..33313492, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 5 NC_016411.2 (32017965..32019851, complement)

    Chromosome 5 - NC_053046.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 4 Neighboring gene ATP-dependent zinc metalloprotease FTSH 4, mitochondrial Neighboring gene ATP-dependent zinc metalloprotease FTSH 4, mitochondrial Neighboring gene F-box only protein 8 Neighboring gene ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC112422159

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053046.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      33311607..33313492 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024784956.1 → XP_024640724.1  uncharacterized protein LOC112422159

      Conserved Domains (2) summary
      cl02808
      Location:37 → 160
      RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...
      pfam13966
      Location:325 → 389
      zf-RVT; zinc-binding in reverse transcriptase
    Nucleotide Protein
    Heading Accession and Version

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