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    LOC112418547 ATP-dependent DNA helicase pif1-like [ Medicago truncatula (barrel medic) ]

    Gene ID: 112418547, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC112418547
    Gene description
    ATP-dependent DNA helicase pif1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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    Genomic context

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    See LOC112418547 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 1 NC_053042.1 (19865306..19866791, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 1 NC_016407.2 (19289776..19291261, complement)

    Chromosome 1 - NC_053042.1Genomic Context describing neighboring genes Neighboring gene multifunctional methyltransferase subunit TRM112 homolog A Neighboring gene alkane hydroxylase MAH1 Neighboring gene uncharacterized LOC112418548 Neighboring gene uncharacterized LOC25483235

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in telomere maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-dependent DNA helicase pif1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053042.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      19865306..19866791 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024774940.1 → XP_024630708.1  ATP-dependent DNA helicase pif1-like

      Conserved Domains (2) summary
      pfam05970
      Location:3 → 349
      PIF1; PIF1-like helicase
      cl26262
      Location:386 → 439
      RecD; ATP-dependent exoDNAse (exonuclease V), alpha subunit, helicase superfamily I [Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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