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    LOC112186307 desmethyl-deoxy-podophyllotoxin synthase [ Rosa chinensis ]

    Gene ID: 112186307, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC112186307
    Gene description
    desmethyl-deoxy-podophyllotoxin synthase
    Locus tag
    RchiOBHm_Chr2g0175621
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rosa chinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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    Genomic context

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    See LOC112186307 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current RchiOBHm-V2 (GCF_002994745.2) 2 NC_037089.1 (87740406..87744982)

    Chromosome 2 - NC_037089.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112186309 Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene desmethyl-deoxy-podophyllotoxin synthase Neighboring gene 50S ribosomal protein L27, chloroplastic

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037089.1 Chromosome 2 Reference RchiOBHm-V2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    desmethyl-deoxy-podophyllotoxin synthase
    Names
    putative amorpha-4,11-diene 12 monooxygenase
    putative premnaspirodiene oxygenase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rosa chinensis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RchiOBHm-V2

    Genomic

    1. NC_037089.1 Reference RchiOBHm-V2

      Range
      87740406..87744982
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024324665.2 → XP_024180433.1  desmethyl-deoxy-podophyllotoxin synthase

      Conserved Domains (1) summary
      cl12078
      Location:36 → 508
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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