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    LOC112153729 C-terminal-binding protein 1 [ Oryzias melastigma (Indian medaka) ]

    Gene ID: 112153729, updated on 10-Jul-2024

    Summary

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    Gene symbol
    LOC112153729
    Gene description
    C-terminal-binding protein 1
    See related
    EnsemblRapid:ENSOMEG00005012316
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias melastigma
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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    Genomic context

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    See LOC112153729 in Genome Data Viewer
    Location:
    chromosome: LG10
    Exon count:
    11
    Annotation release Status Assembly LG Location
    101 current ASM292280v2 (GCF_002922805.2) LG10 NC_050521.1 (8760041..8784270, complement)
    100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096089.1 (20010005..20034121, complement)

    Linkage Group LG10 - NC_050521.1Genomic Context describing neighboring genes Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene uncharacterized LOC112153733 Neighboring gene spondin 2b, extracellular matrix protein Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene heterogeneous nuclear ribonucleoprotein A0

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM292280v2 Primary Assembly

    Genomic

    1. NC_050521.1 Reference ASM292280v2 Primary Assembly

      Range
      8760041..8784270 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024284104.2 → XP_024139872.1  C-terminal-binding protein 1

      UniProtKB/TrEMBL
      A0A3B3BZM4, A0A3B3DEU1
      Related
      ENSOMEP00005028230.1, ENSOMET00005030927.1
      Conserved Domains (1) summary
      cd05299
      Location:28 → 346
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein Strain
    Heading Accession and Version

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