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    mcee methylmalonyl CoA epimerase [ Salvelinus sp. IW2-2015 ]

    Gene ID: 111974749, updated on 13-Aug-2024

    Summary

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    Gene symbol
    mcee
    Gene description
    methylmalonyl CoA epimerase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvelinus sp. IW2-2015
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
    Orthologs
    human zebrafish all
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    Genomic context

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    See mcee in Genome Data Viewer
    Location:
    chromosome: LG15
    Exon count:
    4
    Annotation release Status Assembly LG Location
    101 current ASM291031v2 (GCF_002910315.2) LG15 NC_036855.1 (56768720..56770137)

    Linkage Group LG15 - NC_036855.1Genomic Context describing neighboring genes Neighboring gene dihydroorotate dehydrogenase (quinone), mitochondrial Neighboring gene U3 small nucleolar ribonucleoprotein protein MPP10-like Neighboring gene IST1 factor associated with ESCRT-III Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 2b Neighboring gene sorbitol dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036855.1 Chromosome LG15 Reference ASM291031v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methylmalonyl-CoA epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-methylmalonyl-CoA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    methylmalonyl-CoA epimerase, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM291031v2 Primary Assembly

    Genomic

    1. NC_036855.1 Reference ASM291031v2 Primary Assembly

      Range
      56768720..56770137
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024002720.2 → XP_023858488.1  methylmalonyl-CoA epimerase, mitochondrial isoform X1

      Conserved Domains (1) summary
      TIGR03081
      Location:126 → 254
      metmalonyl_epim; methylmalonyl-CoA epimerase

    2. XM_024002721.2 → XP_023858489.1  methylmalonyl-CoA epimerase, mitochondrial isoform X2

      Conserved Domains (1) summary
      TIGR03081
      Location:124 → 252
      metmalonyl_epim; methylmalonyl-CoA epimerase

    3. XM_024002722.2 → XP_023858490.1  methylmalonyl-CoA epimerase, mitochondrial isoform X3

      Conserved Domains (1) summary
      TIGR03081
      Location:24 → 152
      metmalonyl_epim; methylmalonyl-CoA epimerase
    Nucleotide Protein
    Heading Accession and Version

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