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    LOC111811343 inactive poly [ADP-ribose] polymerase RCD1-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111811343, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC111811343
    Gene description
    inactive poly [ADP-ribose] polymerase RCD1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111811343 in Genome Data Viewer
    Location:
    chromosome: LG15
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG15 NC_036652.1 (1554924..1560825)

    Chromosome LG15 - NC_036652.1Genomic Context describing neighboring genes Neighboring gene probable xyloglucan endotransglucosylase/hydrolase protein 30 Neighboring gene glycerol-3-phosphate acyltransferase, chloroplastic-like Neighboring gene probable transcription factor KAN2 Neighboring gene lysine-specific demethylase JMJ706-like Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036652.1 Chromosome LG15 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inactive poly [ADP-ribose] polymerase RCD1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036652.1 Reference ASM280686v2 Primary Assembly

      Range
      1554924..1560825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023698145.1 → XP_023553913.1  inactive poly [ADP-ribose] polymerase RCD1-like

      Conserved Domains (2) summary
      pfam12174
      Location:490 → 554
      RST; RCD1-SRO-TAF4 (RST) plant domain
      cl00283
      Location:355 → 438
      ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

    2. XM_023698146.1 → XP_023553914.1  inactive poly [ADP-ribose] polymerase RCD1-like

      Conserved Domains (2) summary
      pfam12174
      Location:490 → 554
      RST; RCD1-SRO-TAF4 (RST) plant domain
      cl00283
      Location:355 → 438
      ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...
    Nucleotide Protein
    Heading Accession and Version

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