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    LOC111805169 probable serine/threonine-protein kinase At1g01540 [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111805169, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111805169
    Gene description
    probable serine/threonine-protein kinase At1g01540
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111805169 in Genome Data Viewer
    Location:
    chromosome: LG11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG11 NC_036648.1 (786025..788911)

    Chromosome LG11 - NC_036648.1Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase RHG1A Neighboring gene transcription factor SPATULA-like Neighboring gene uncharacterized LOC111805173 Neighboring gene heat stress transcription factor B-4-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036648.1 Chromosome LG11 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable serine/threonine-protein kinase At1g01540

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036648.1 Reference ASM280686v2 Primary Assembly

      Range
      786025..788911
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023690095.1 → XP_023545863.1  probable serine/threonine-protein kinase At1g01540

      Conserved Domains (1) summary
      cd14066
      Location:188 → 454
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    Nucleotide Protein
    Heading Accession and Version

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