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    LOC111804317 GDSL esterase/lipase At5g03610-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111804317, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111804317
    Gene description
    GDSL esterase/lipase At5g03610-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111804317 in Genome Data Viewer
    Location:
    chromosome: LG10
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG10 NC_036647.1 (1630054..1631613, complement)

    Chromosome LG10 - NC_036647.1Genomic Context describing neighboring genes Neighboring gene IQ domain-containing protein IQM3-like Neighboring gene GDSL esterase/lipase At5g03610-like Neighboring gene transcription initiation factor TFIID subunit 12 Neighboring gene zinc finger A20 and AN1 domain-containing stress-associated protein 6-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036647.1 Chromosome LG10 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDSL esterase/lipase At5g03610-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036647.1 Reference ASM280686v2 Primary Assembly

      Range
      1630054..1631613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023689078.1 → XP_023544846.1  GDSL esterase/lipase At5g03610-like

      Conserved Domains (1) summary
      cd01837
      Location:47 → 352
      SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...
    Nucleotide Protein
    Heading Accession and Version

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