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    LOC111798551 protease Do-like 10, mitochondrial [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111798551, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111798551
    Gene description
    protease Do-like 10, mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111798551 in Genome Data Viewer
    Location:
    chromosome: LG07
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG07 NC_036644.1 (6912785..6918788)

    Chromosome LG07 - NC_036644.1Genomic Context describing neighboring genes Neighboring gene ethylene receptor 1-like Neighboring gene conserved oligomeric Golgi complex subunit 1-like Neighboring gene stromal processing peptidase, chloroplastic-like Neighboring gene beta-hexosaminidase 3-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036644.1 Chromosome LG07 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protease Do-like 10, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036644.1 Reference ASM280686v2 Primary Assembly

      Range
      6912785..6918788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023681781.1 → XP_023537549.1  protease Do-like 10, mitochondrial

      Conserved Domains (1) summary
      COG0265
      Location:121 → 437
      DegQ; Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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