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    LOC111780897 biotin--protein ligase 2-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

    Gene ID: 111780897, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111780897
    Gene description
    biotin--protein ligase 2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita pepo subsp. pepo (sub-species: pepo)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111780897 in Genome Data Viewer
    Location:
    chromosome: LG01
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM280686v2 (GCF_002806865.1) LG01 NC_036638.1 (17264605..17271306, complement)

    Chromosome LG01 - NC_036638.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 4-phosphate 5-kinase 1 Neighboring gene oxysterol-binding protein-related protein 1C-like Neighboring gene probable serine/threonine-protein kinase mps1 Neighboring gene uncharacterized LOC111789980

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036638.1 Chromosome LG01 Reference ASM280686v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables biotin-[acetyl-CoA-carboxylase] ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein modification process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    biotin--protein ligase 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM280686v2 Primary Assembly

    Genomic

    1. NC_036638.1 Reference ASM280686v2 Primary Assembly

      Range
      17264605..17271306 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023661249.1 → XP_023517017.1  biotin--protein ligase 2-like

      Conserved Domains (2) summary
      pfam02237
      Location:326 → 380
      BPL_C; Biotin protein ligase C terminal domain
      cd16442
      Location:133 → 308
      BPL; biotin protein ligase
    Nucleotide Protein
    Heading Accession and Version

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