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    ATXN7L1 ataxin 7 like 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

    Gene ID: 111520377, updated on 15-Mar-2024

    Summary

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    Gene symbol
    ATXN7L1
    Gene description
    ataxin 7 like 1
    See related
    Ensembl:ENSPTEG00000038799
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Piliocolobus tephrosceles
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
    Orthologs
    human mouse all
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    Genomic context

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    See ATXN7L1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    102 current ASM277652v3 (GCF_002776525.3) 8 NC_045441.1 (98196828..98465186, complement)
    100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318071.1 (4550994..4820394)

    Chromosome 8 - NC_045441.1Genomic Context describing neighboring genes Neighboring gene pseudouridine synthase 7 Neighboring gene RAD50 interactor 1 Neighboring gene EF-hand calcium binding domain 10 Neighboring gene uncharacterized LOC111520380 Neighboring gene 60S ribosomal protein L13a-like Neighboring gene uncharacterized LOC111520376 Neighboring gene cadherin related family member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    ataxin-7-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM277652v3

    Genomic

    1. NC_045441.1 Reference ASM277652v3

      Range
      98196828..98465186 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023183053.1 → XP_023038821.1  ataxin-7-like protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:254 → 320
      SCA7; zinc-binding domain

    2. XM_023183054.1 → XP_023038822.1  ataxin-7-like protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C9JAD6
      Conserved Domains (1) summary
      pfam08313
      Location:242 → 308
      SCA7; zinc-binding domain

    3. XM_023183060.1 → XP_023038828.1  ataxin-7-like protein 1 isoform X9

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Related
      ENSPTEP00000042538.1, ENSPTET00000056696.1
      Conserved Domains (1) summary
      pfam08313
      Location:277 → 343
      SCA7; zinc-binding domain

    4. XM_023183059.1 → XP_023038827.1  ataxin-7-like protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A8C9IVE8, A0A8C9M070
      Related
      ENSPTEP00000042533.1, ENSPTET00000056690.1
      Conserved Domains (1) summary
      pfam08313
      Location:277 → 343
      SCA7; zinc-binding domain

    5. XM_023183058.1 → XP_023038826.1  ataxin-7-like protein 1 isoform X7

      Conserved Domains (1) summary
      pfam08313
      Location:277 → 343
      SCA7; zinc-binding domain

    6. XM_023183057.1 → XP_023038825.1  ataxin-7-like protein 1 isoform X6

      Conserved Domains (1) summary
      pfam08313
      Location:277 → 343
      SCA7; zinc-binding domain

    7. XM_023183052.1 → XP_023038820.1  ataxin-7-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:277 → 343
      SCA7; zinc-binding domain

    8. XM_023183051.1 → XP_023038819.1  ataxin-7-like protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:277 → 343
      SCA7; zinc-binding domain

    9. XM_023183055.2 → XP_023038823.1  ataxin-7-like protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:193 → 259
      SCA7; zinc-binding domain

    10. XM_023183056.1 → XP_023038824.1  ataxin-7-like protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Related
      ENSPTEP00000042541.1, ENSPTET00000056700.1
      Conserved Domains (1) summary
      pfam08313
      Location:193 → 259
      SCA7; zinc-binding domain

    11. XM_023183065.1 → XP_023038833.1  ataxin-7-like protein 1 isoform X10

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:153 → 219
      SCA7; zinc-binding domain

    12. XM_023183063.2 → XP_023038831.1  ataxin-7-like protein 1 isoform X10

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:153 → 219
      SCA7; zinc-binding domain

    13. XM_023183067.1 → XP_023038835.1  ataxin-7-like protein 1 isoform X12

      UniProtKB/TrEMBL
      A0A8C9IVE8, A0A8C9M185
      Related
      ENSPTEP00000042544.1, ENSPTET00000056703.1
      Conserved Domains (1) summary
      pfam08313
      Location:153 → 219
      SCA7; zinc-binding domain

    14. XM_023183062.1 → XP_023038830.1  ataxin-7-like protein 1 isoform X10

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:153 → 219
      SCA7; zinc-binding domain

    15. XM_023183061.1 → XP_023038829.1  ataxin-7-like protein 1 isoform X10

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:153 → 219
      SCA7; zinc-binding domain

    16. XM_023183066.1 → XP_023038834.1  ataxin-7-like protein 1 isoform X11

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:61 → 127
      SCA7; zinc-binding domain

    17. XM_031936063.1 → XP_031791923.1  ataxin-7-like protein 1 isoform X13

      UniProtKB/TrEMBL
      A0A8C9IVE8
      Conserved Domains (1) summary
      pfam08313
      Location:67 → 127
      SCA7; zinc-binding domain

    18. XM_023183068.1 → XP_023038836.1  ataxin-7-like protein 1 isoform X14

    RNA

    1. XR_002724661.1 RNA Sequence

    2. XR_002724664.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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