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    LOC111489401 nematode resistance protein-like HSPRO2 [ Cucurbita maxima (winter squash) ]

    Gene ID: 111489401, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111489401
    Gene description
    nematode resistance protein-like HSPRO2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita maxima
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111489401 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current Cmax_1.0 (GCF_002738345.1) Unplaced Scaffold NW_019272030.1 (4580981..4582764)

    NW_019272030.1Genomic Context describing neighboring genes Neighboring gene probable zinc metalloprotease EGY2, chloroplastic Neighboring gene auxin transporter-like protein 1 Neighboring gene eukaryotic translation initiation factor 3 subunit F-like Neighboring gene transfer RNA lysine (anticodon CUU)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019272030 Unplaced Scaffold Reference Cmax_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tryptophan catabolic process to kynurenine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nematode resistance protein-like HSPRO2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita maxima Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmax_1.0

    Genomic

    1. NW_019272030.1 Reference Cmax_1.0

      Range
      4580981..4582764
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023137592.1 → XP_022993360.1  nematode resistance protein-like HSPRO2

      UniProtKB/TrEMBL
      A0A6J1JYB4
      Conserved Domains (2) summary
      pfam07231
      Location:1 → 203
      Hs1pro-1_N; Hs1pro-1 N-terminus
      pfam07014
      Location:206 → 460
      Hs1pro-1_C; Hs1pro-1 protein C-terminus
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases