U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC111478893 protein REDUCED WALL ACETYLATION 3 [ Cucurbita maxima (winter squash) ]

    Gene ID: 111478893, updated on 22-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111478893
    Gene description
    protein REDUCED WALL ACETYLATION 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita maxima
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111478893 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current Cmax_1.0 (GCF_002738345.1) Unplaced Scaffold NW_019272020.1 (666789..672937, complement)

    NW_019272020.1Genomic Context describing neighboring genes Neighboring gene chlorophyll a-b binding protein of LHCII type 1-like Neighboring gene chlorophyll a-b binding protein of LHCII type 1-like Neighboring gene probable WRKY transcription factor 71 Neighboring gene two-pore potassium channel 3-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_019272020 Unplaced Scaffold Reference Cmax_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in plant-type secondary cell wall biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in xylan acetylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in xylan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in xyloglucan metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein REDUCED WALL ACETYLATION 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucurbita maxima Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmax_1.0

    Genomic

    1. NW_019272020.1 Reference Cmax_1.0

      Range
      666789..672937 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023123407.1 → XP_022979175.1  protein REDUCED WALL ACETYLATION 3 isoform X2

      UniProtKB/TrEMBL
      A0A6J1ISH4
      Conserved Domains (1) summary
      pfam07779
      Location:100 → 520
      Cas1_AcylT; 10 TM Acyl Transferase domain found in Cas1p

    2. XM_023123406.1 → XP_022979174.1  protein REDUCED WALL ACETYLATION 3 isoform X1

      UniProtKB/TrEMBL
      A0A6J1IVZ0
      Conserved Domains (1) summary
      pfam07779
      Location:106 → 526
      Cas1_AcylT; 10 TM Acyl Transferase domain found in Cas1p
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases