U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC111462829 F-box/kelch-repeat protein At1g23390-like [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111462829, updated on 22-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC111462829
    Gene description
    F-box/kelch-repeat protein At1g23390-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC111462829 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268543.1 (121102..122895)

    NW_019268543.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111462792 Neighboring gene ATP-citrate synthase alpha chain protein 1-like Neighboring gene protein NSP-INTERACTING KINASE 3-like Neighboring gene protein trichome birefringence-like 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_019268543 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    F-box/kelch-repeat protein At1g23390-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268543.1 Reference Cmos_1.0

      Range
      121102..122895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023106592.1 → XP_022962360.1  F-box/kelch-repeat protein At1g23390-like isoform X1

      UniProtKB/TrEMBL
      A0A6J1HEU1
      Conserved Domains (3) summary
      smart00256
      Location:13 → 42
      FBOX; A Receptor for Ubiquitination Targets
      sd00038
      Location:143 → 192
      Kelch; KELCH repeat [structural motif]
      pfam13964
      Location:142 → 193
      Kelch_6; Kelch motif

    2. XM_023106593.1 → XP_022962361.1  F-box/kelch-repeat protein At1g23390-like isoform X2

      UniProtKB/TrEMBL
      A0A6J1HCW8
      Conserved Domains (3) summary
      smart00256
      Location:13 → 42
      FBOX; A Receptor for Ubiquitination Targets
      sd00038
      Location:139 → 188
      Kelch; KELCH repeat [structural motif]
      pfam13964
      Location:138 → 189
      Kelch_6; Kelch motif
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases