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    LOC111437680 probable fucosyltransferase 8 [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111437680, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111437680
    Gene description
    probable fucosyltransferase 8
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111437680 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268580.1 (786904..789034)

    NW_019268580.1Genomic Context describing neighboring genes Neighboring gene oxygen-evolving enhancer protein 2, chloroplastic Neighboring gene DExH-box ATP-dependent RNA helicase DExH6-like Neighboring gene BTB/POZ domain and ankyrin repeat-containing protein NPR2-like Neighboring gene phytoene synthase 2, chloroplastic-like Neighboring gene protein JASON-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268580 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables galactoside 2-alpha-L-fucosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell wall biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in xyloglucan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable fucosyltransferase 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268580.1 Reference Cmos_1.0

      Range
      786904..789034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023075760.1 → XP_022931528.1  probable fucosyltransferase 8 isoform X1

      UniProtKB/TrEMBL
      A0A6J1EYX8
      Conserved Domains (1) summary
      cl16914
      Location:54 → 520
      O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

    2. XM_023075761.1 → XP_022931529.1  probable fucosyltransferase 8 isoform X2

      UniProtKB/TrEMBL
      A0A6J1EUH3
      Conserved Domains (1) summary
      cl16914
      Location:53 → 519
      O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
    Nucleotide Protein
    Heading Accession and Version

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