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    LOC111434891 WAT1-related protein At5g64700-like [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111434891, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111434891
    Gene description
    WAT1-related protein At5g64700-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111434891 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268563.1 (297185..337022, complement)

    NW_019268563.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA Z247 Neighboring gene WAT1-related protein At5g64700-like Neighboring gene uncharacterized LOC111434983 Neighboring gene probable mannitol dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268563 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WAT1-related protein At5g64700-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268563.1 Reference Cmos_1.0

      Range
      297185..337022 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023072218.1 → XP_022927986.1  WAT1-related protein At5g64700-like isoform X2

      UniProtKB/TrEMBL
      A0A6J1EJ08
      Conserved Domains (1) summary
      PLN00411
      Location:8 → 328
      PLN00411; nodulin MtN21 family protein; Provisional

    2. XM_023072219.1 → XP_022927987.1  WAT1-related protein At5g64700-like isoform X3

      UniProtKB/TrEMBL
      A0A6J1EIN9
      Conserved Domains (1) summary
      PLN00411
      Location:8 → 328
      PLN00411; nodulin MtN21 family protein; Provisional

    3. XM_023072217.1 → XP_022927985.1  WAT1-related protein At5g64700-like isoform X1

      UniProtKB/TrEMBL
      A0A6J1EQE0
      Conserved Domains (1) summary
      PLN00411
      Location:8 → 328
      PLN00411; nodulin MtN21 family protein; Provisional

    4. XM_023072222.1 → XP_022927990.1  WAT1-related protein At5g64700-like isoform X5

      UniProtKB/TrEMBL
      A0A6J1EQE6
      Conserved Domains (1) summary
      PLN00411
      Location:8 → 326
      PLN00411; nodulin MtN21 family protein; Provisional

    5. XM_023072221.1 → XP_022927989.1  WAT1-related protein At5g64700-like isoform X4

      UniProtKB/TrEMBL
      A0A6J1EJJ5
      Conserved Domains (1) summary
      PLN00411
      Location:8 → 339
      PLN00411; nodulin MtN21 family protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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