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    LOC111434340 phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111434340, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111434340
    Gene description
    phospho-N-acetylmuramoyl-pentapeptide-transferase homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111434340 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268560.1 (2512657..2519925)

    NW_019268560.1Genomic Context describing neighboring genes Neighboring gene potassium channel KAT1-like Neighboring gene prefoldin subunit 6-like Neighboring gene 40S ribosomal protein S14-2-like Neighboring gene 60S ribosomal protein L18a-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268560 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell wall macromolecule biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phospho-N-acetylmuramoyl-pentapeptide-transferase homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268560.1 Reference Cmos_1.0

      Range
      2512657..2519925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023071777.1 → XP_022927545.1  phospho-N-acetylmuramoyl-pentapeptide-transferase homolog

      UniProtKB/TrEMBL
      A0A6J1EP98
      Conserved Domains (1) summary
      cd06852
      Location:230 → 516
      GT_MraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) is an enzyme responsible for the formation of the first lipid intermediate in the synthesis of bacterial cell wall peptidoglycan. It catalyzes the formation of ...
    Nucleotide Protein
    Heading Accession and Version

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