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    LOC111433526 mitochondrial inner membrane protease subunit 1-like [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111433526, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111433526
    Gene description
    mitochondrial inner membrane protease subunit 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111433526 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268559.1 (669201..677382, complement)

    NW_019268559.1Genomic Context describing neighboring genes Neighboring gene DNA replication licensing factor MCM3 homolog 1 Neighboring gene agamous-like MADS-box protein AGL61 Neighboring gene probable beta-D-xylosidase 5 Neighboring gene beta-xylosidase/alpha-L-arabinofuranosidase 1-like Neighboring gene beta-xylosidase/alpha-L-arabinofuranosidase 1-like Neighboring gene mitochondrial inner membrane protease subunit 1-like Neighboring gene beta-xylosidase/alpha-L-arabinofuranosidase 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268559 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein processing involved in protein targeting to mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal peptide processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of mitochondrial inner membrane peptidase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial inner membrane protease subunit 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268559.1 Reference Cmos_1.0

      Range
      669201..677382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023070586.1 → XP_022926354.1  mitochondrial inner membrane protease subunit 1-like

      UniProtKB/TrEMBL
      A0A6J1EKV6
      Conserved Domains (1) summary
      TIGR02227
      Location:46 → 158
      sigpep_I_bact; signal peptidase I, bacterial type

    2. XM_023070585.1 → XP_022926353.1  mitochondrial inner membrane protease subunit 1-like

      UniProtKB/TrEMBL
      A0A6J1EKV6
      Conserved Domains (1) summary
      TIGR02227
      Location:46 → 158
      sigpep_I_bact; signal peptidase I, bacterial type

    3. XM_023070581.1 → XP_022926349.1  mitochondrial inner membrane protease subunit 1-like

      UniProtKB/TrEMBL
      A0A6J1EKV6
      Conserved Domains (1) summary
      TIGR02227
      Location:46 → 158
      sigpep_I_bact; signal peptidase I, bacterial type

    4. XM_023070582.1 → XP_022926350.1  mitochondrial inner membrane protease subunit 1-like

      UniProtKB/TrEMBL
      A0A6J1EKV6
      Conserved Domains (1) summary
      TIGR02227
      Location:46 → 158
      sigpep_I_bact; signal peptidase I, bacterial type

    5. XM_023070583.1 → XP_022926351.1  mitochondrial inner membrane protease subunit 1-like

      UniProtKB/TrEMBL
      A0A6J1EKV6
      Conserved Domains (1) summary
      TIGR02227
      Location:46 → 158
      sigpep_I_bact; signal peptidase I, bacterial type
    Nucleotide Protein
    Heading Accession and Version

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