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    LOC111431561 uncharacterized LOC111431561 [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111431561, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111431561
    Gene description
    uncharacterized LOC111431561
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111431561 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268552.1 (833380..834956, complement)

    NW_019268552.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111431459 Neighboring gene uncharacterized LOC111431458 Neighboring gene AAA-ATPase At3g28580-like Neighboring gene HIPL1 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268552 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables dynein light intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of dynein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC111431561

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268552.1 Reference Cmos_1.0

      Range
      833380..834956 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023068244.1 → XP_022924012.1  uncharacterized protein LOC111431561

      UniProtKB/TrEMBL
      A0A6J1E7P6
      Conserved Domains (1) summary
      cl03131
      Location:187 → 288
      Dynein_light; Dynein light chain type 1
    Nucleotide Protein
    Heading Accession and Version

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