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    LOC111431367 NAP1-related protein 1-like [ Cucurbita moschata (crookneck pumpkin) ]

    Gene ID: 111431367, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111431367
    Gene description
    NAP1-related protein 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucurbita moschata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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    Genomic context

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    See LOC111431367 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268552.1 (1960553..1964231, complement)

    NW_019268552.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated protein RP/EB family member 1B-like Neighboring gene HVA22-like protein a Neighboring gene 1-aminocyclopropane-1-carboxylate oxidase 1-like Neighboring gene protein PHYTOCHROME KINASE SUBSTRATE 3-like Neighboring gene uncharacterized LOC111431364

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019268552 Unplaced Scaffold Reference Cmos_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nucleosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAP1-related protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cmos_1.0

    Genomic

    1. NW_019268552.1 Reference Cmos_1.0

      Range
      1960553..1964231 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023067987.1 → XP_022923755.1  NAP1-related protein 1-like

      UniProtKB/TrEMBL
      A0A6J1ECT4
      Conserved Domains (1) summary
      pfam00956
      Location:31 → 220
      NAP; Nucleosome assembly protein (NAP)
    Nucleotide Protein
    Heading Accession and Version

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