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    LOC111419229 tryptophan 5-hydroxylase 1 [ Onthophagus taurus ]

    Gene ID: 111419229, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC111419229
    Gene description
    tryptophan 5-hydroxylase 1
    See related
    EnsemblRapid:LOC111419229
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Onthophagus taurus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Scarabaeiformia; Scarabaeidae; Scarabaeinae; Onthophagini; Onthophagus
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC111419229 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Otau_2.0 (GCF_000648695.1) Unplaced Scaffold NW_019280895.1 (81529..83504, complement)

    NW_019280895.1Genomic Context describing neighboring genes Neighboring gene Thioredoxin reductase 1 Neighboring gene SDR family oxidoreductase sniffer Neighboring gene matrix metalloproteinase-2-like Neighboring gene uncharacterized LOC111419231 Neighboring gene JNK-interacting protein Aplip1 Neighboring gene mucin-2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019280895 Unplaced Scaffold Reference Otau_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tryptophan 5-monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aromatic amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in serotonin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tryptophan 5-hydroxylase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Onthophagus taurus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Otau_2.0

    Genomic

    1. NW_019280895.1 Reference Otau_2.0

      Range
      81529..83504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023052013.1 → XP_022907781.1  tryptophan 5-hydroxylase 1 isoform X2

      Related
      XP_022907781.1, XM_023052013.1
      Conserved Domains (1) summary
      cl01244
      Location:18 → 451
      arom_aa_hydroxylase; Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan ...

    2. XM_023052012.1 → XP_022907780.1  tryptophan 5-hydroxylase 1 isoform X1

      Related
      XP_022907780.1, XM_023052012.1
      Conserved Domains (1) summary
      cl01244
      Location:18 → 475
      arom_aa_hydroxylase; Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan ...
    Nucleotide Protein
    Heading Accession and Version

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