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    LOC111334452 mitochondrial carnitine/acylcarnitine carrier protein-like [ Stylophora pistillata ]

    Gene ID: 111334452, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC111334452
    Gene description
    mitochondrial carnitine/acylcarnitine carrier protein-like
    Locus tag
    AWC38_SpisGene13215
    See related
    EnsemblRapid:LOC111334452
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Stylophora pistillata
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora
    Also known as
    trim71; Slc25a20
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    Genomic context

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    See LOC111334452 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Stylophora pistillata v1 (GCF_002571385.1) Unplaced Scaffold NW_019218028.1 (196455..224469, complement)

    NW_019218028.1Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin-dependent protein kinase type IV-like Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene cullin-2-like Neighboring gene E3 ubiquitin-protein ligase TRIM71-like Neighboring gene uncharacterized LOC111334450 Neighboring gene uncharacterized LOC111334453 Neighboring gene acyl-CoA-binding protein-like Neighboring gene kinesin heavy chain-like Neighboring gene cystatin-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019218028 Unplaced Scaffold Reference Stylophora pistillata v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of microRNAs in the coral Stylophora pistillata. Liew YJ, et al. PLoS One, 2014. PMID 24658574, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acyl carnitine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carnitine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial carnitine/acylcarnitine carrier protein-like
    Names
    E3 ubiquitin-protein ligase TRIM71
    Mitochondrial carnitine/acylcarnitine carrier protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Stylophora pistillata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Stylophora pistillata v1 Primary Assembly

    Genomic

    1. NW_019218028.1 Reference Stylophora pistillata v1 Primary Assembly

      Range
      196455..224469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022940188.1 → XP_022795923.1  mitochondrial carnitine/acylcarnitine carrier protein-like

      Related
      XP_022795923.1, XM_022940188.1
      Conserved Domains (1) summary
      pfam00153
      Location:122 → 213
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

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