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    acsf3 acyl-CoA synthetase family member 3 [ Seriola dumerili (greater amberjack) ]

    Gene ID: 111238435, updated on 15-Mar-2024

    Summary

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    Gene symbol
    acsf3
    Gene description
    acyl-CoA synthetase family member 3
    See related
    Ensembl:ENSSDUG00000007083
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Seriola dumerili
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
    Orthologs
    human zebrafish all
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    Genomic context

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    See acsf3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019175554.1 (2197580..2228808)

    NW_019175554.1Genomic Context describing neighboring genes Neighboring gene PABPN1 like, cytoplasmic Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene cadherin 15, type 1, M-cadherin (myotubule) Neighboring gene SPG7 matrix AAA peptidase subunit, paraplegin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019175554 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables medium-chain fatty acid-CoA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acyl-CoA synthetase family member 3, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sdu_1.0 Primary Assembly

    Genomic

    1. NW_019175554.1 Reference Sdu_1.0 Primary Assembly

      Range
      2197580..2228808
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022767934.1 → XP_022623655.1  acyl-CoA synthetase family member 3, mitochondrial

      UniProtKB/TrEMBL
      A0A3B4TUD7
      Related
      ENSSDUP00000009647.1, ENSSDUT00000009835.1
      Conserved Domains (1) summary
      cd05941
      Location:71 → 578
      MCS; Malonyl-CoA synthetase (MCS)

    2. XM_022767935.1 → XP_022623656.1  acyl-CoA synthetase family member 3, mitochondrial

      UniProtKB/TrEMBL
      A0A3B4TUD7
      Conserved Domains (1) summary
      cd05941
      Location:71 → 578
      MCS; Malonyl-CoA synthetase (MCS)
    Nucleotide Protein
    Heading Accession and Version

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