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    LOC111223541 clumping factor A-like [ Seriola dumerili (greater amberjack) ]

    Gene ID: 111223541, updated on 24-Jul-2021

    Summary

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    Gene symbol
    LOC111223541
    Gene description
    clumping factor A-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Seriola dumerili
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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    Genomic context

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    See LOC111223541 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174365.1 (12411025..12422455)

    NW_019174365.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111223294 Neighboring gene RNA (guanine-7-) methyltransferase Neighboring gene heat shock transcription factor 1 Neighboring gene BOP1 ribosomal biogenesis factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019174365 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC111223541

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sdu_1.0 Primary Assembly

    Genomic

    1. NW_019174365.1 Reference Sdu_1.0 Primary Assembly

      Range
      12411025..12422455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022747732.1 → XP_022603453.1  uncharacterized protein LOC111223541

      Conserved Domains (1) summary
      cl26761
      Location:118 → 443
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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