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    LOC111017023 SMR domain-containing protein At5g58720 [ Momordica charantia (bitter melon) ]

    Gene ID: 111017023, updated on 25-Aug-2022

    Summary

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    Gene symbol
    LOC111017023
    Gene description
    SMR domain-containing protein At5g58720
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Momordica charantia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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    Genomic context

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    See LOC111017023 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104538.1 (573532..580362)

    NW_019104538.1Genomic Context describing neighboring genes Neighboring gene protein DAMAGED DNA-BINDING 2 Neighboring gene ABC transporter G family member 31 Neighboring gene peptidyl-prolyl cis-trans isomerase CYP20-1-like Neighboring gene uncharacterized LOC111017003

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019104538 Unplaced Scaffold Reference ASM199503v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    SMR domain-containing protein At5g58720

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM199503v1

    Genomic

    1. NW_019104538.1 Reference ASM199503v1

      Range
      573532..580362
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022292657.1 → XP_022148349.1  SMR domain-containing protein At5g58720 isoform X2

      UniProtKB/TrEMBL
      A0A6J1D3R1
      Conserved Domains (3) summary
      smart00463
      Location:419 → 493
      SMR; Small MutS-related domain
      pfam08590
      Location:351 → 407
      DUF1771; Domain of unknown function (DUF1771)
      cl21463
      Location:146 → 189
      UBA_like_SF; UBA domain-like superfamily

    2. XM_022292656.1 → XP_022148348.1  SMR domain-containing protein At5g58720 isoform X1

      UniProtKB/TrEMBL
      A0A6J1D3V5
      Conserved Domains (3) summary
      smart00463
      Location:424 → 498
      SMR; Small MutS-related domain
      pfam08590
      Location:356 → 412
      DUF1771; Domain of unknown function (DUF1771)
      cl21463
      Location:151 → 194
      UBA_like_SF; UBA domain-like superfamily

    3. XM_022292658.1 → XP_022148350.1  SMR domain-containing protein At5g58720 isoform X3

      UniProtKB/TrEMBL
      A0A6J1D2N8
      Conserved Domains (3) summary
      smart00463
      Location:413 → 487
      SMR; Small MutS-related domain
      pfam08590
      Location:345 → 401
      DUF1771; Domain of unknown function (DUF1771)
      cl21463
      Location:151 → 194
      UBA_like_SF; UBA domain-like superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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