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    LOC111014921 aconitate hydratase, cytoplasmic-like [ Momordica charantia (bitter melon) ]

    Gene ID: 111014921, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111014921
    Gene description
    aconitate hydratase, cytoplasmic-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Momordica charantia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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    Genomic context

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    See LOC111014921 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104523.1 (1258575..1263227)

    NW_019104523.1Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 46 Neighboring gene NEP1-interacting protein 2-like Neighboring gene uncharacterized protein At4g08330, chloroplastic Neighboring gene DNA-directed RNA polymerase II subunit 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019104523 Unplaced Scaffold Reference ASM199503v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables aconitate hydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in citrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aconitate hydratase, cytoplasmic-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM199503v1

    Genomic

    1. NW_019104523.1 Reference ASM199503v1

      Range
      1258575..1263227
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022289791.1 → XP_022145483.1  aconitate hydratase, cytoplasmic-like isoform X1

      UniProtKB/TrEMBL
      A0A6J1CW20
      Conserved Domains (1) summary
      cl28376
      Location:21 → 700
      AcnA; Aconitase A [Energy production and conversion]

    2. XM_022289792.1 → XP_022145484.1  aconitate hydratase, cytoplasmic-like isoform X2

      UniProtKB/TrEMBL
      A0A6J1CVD7
      Conserved Domains (1) summary
      cl28376
      Location:21 → 684
      AcnA; Aconitase A [Energy production and conversion]
    Nucleotide Protein Strain
    Heading Accession and Version

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