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    LOC111012391 transcription factor bHLH110 [ Momordica charantia (bitter melon) ]

    Gene ID: 111012391, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC111012391
    Gene description
    transcription factor bHLH110
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Momordica charantia
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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    Genomic context

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    See LOC111012391 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current ASM199503v1 (GCF_001995035.1) Unplaced Scaffold NW_019104488.1 (6082191..6085441, complement)

    NW_019104488.1Genomic Context describing neighboring genes Neighboring gene AAA-ATPase At3g50940-like Neighboring gene bifunctional nuclease 1 Neighboring gene omega-hydroxypalmitate O-feruloyl transferase Neighboring gene AP-4 complex subunit mu

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019104488 Unplaced Scaffold Reference ASM199503v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor bHLH110

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Momordica charantia Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM199503v1

    Genomic

    1. NW_019104488.1 Reference ASM199503v1

      Range
      6082191..6085441 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022286567.1 → XP_022142259.1  transcription factor bHLH110 isoform X1

      UniProtKB/TrEMBL
      A0A6J1CL27
      Conserved Domains (1) summary
      smart00353
      Location:330 → 375
      HLH; helix loop helix domain

    2. XM_022286642.1 → XP_022142334.1  transcription factor bHLH110 isoform X2

      UniProtKB/TrEMBL
      A0A6J1CLA6
      Conserved Domains (1) summary
      smart00353
      Location:330 → 372
      HLH; helix loop helix domain
    Nucleotide Protein Strain
    Heading Accession and Version

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