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    LOC110776114 probable galacturonosyltransferase 10 [ Spinacia oleracea (spinach) ]

    Gene ID: 110776114, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC110776114
    Gene description
    probable galacturonosyltransferase 10
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Spinacia oleracea
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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    Genomic context

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    See LOC110776114 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_06 current BTI_SOV_V1 (GCF_020520425.1) 2 NC_079488.1 (88511516..88519228, complement)
    100 previous assembly ASM200726v1 (GCF_002007265.1) Unplaced Scaffold NW_018933361.1 (66053..73721, complement)

    Chromosome 2 - NC_079488.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110776119 Neighboring gene uncharacterized LOC110789603 Neighboring gene probable serine/threonine-protein kinase At1g54610 Neighboring gene uncharacterized LOC130467989 Neighboring gene pentatricopeptide repeat-containing protein At5g61800 Neighboring gene wax ester synthase/diacylglycerol acyltransferase 4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable galacturonosyltransferase 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_020520425.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BTI_SOV_V1 Primary Assembly

    Genomic

    1. NC_079488.1 Reference BTI_SOV_V1 Primary Assembly

      Range
      88511516..88519228 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021980673.2 → XP_021836365.1  probable galacturonosyltransferase 10

      UniProtKB/TrEMBL
      A0A9R0JIU4
      Conserved Domains (1) summary
      PLN02742
      Location:1 → 534
      PLN02742; Probable galacturonosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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