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    LOC110750322 cytochrome P450 84A1-like [ Prunus avium (sweet cherry) ]

    Gene ID: 110750322, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC110750322
    Gene description
    cytochrome P450 84A1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Prunus avium
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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    Genomic context

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    See LOC110750322 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current PAV_r1.0 (GCF_002207925.1) Unplaced Scaffold NW_018921393.1 (260623..264473, complement)

    NW_018921393.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain-containing protein 19 Neighboring gene uncharacterized LOC110750313 Neighboring gene protein FMP32, mitochondrial Neighboring gene GATA transcription factor 5-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018921393 Unplaced Scaffold Reference PAV_r1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lignin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450 84A1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Prunus avium Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PAV_r1.0

    Genomic

    1. NW_018921393.1 Reference PAV_r1.0

      Range
      260623..264473 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021950624.1 → XP_021806316.1  cytochrome P450 84A1-like

      UniProtKB/TrEMBL
      A0A6P5RYS7
      Conserved Domains (1) summary
      cl12078
      Location:10 → 522
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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