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    LOC110654066 GTP-binding nuclear protein Ran-3 [ Hevea brasiliensis (rubber tree) ]

    Gene ID: 110654066, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC110654066
    Gene description
    GTP-binding nuclear protein Ran-3
    Locus tag
    P3X46_007787
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hevea brasiliensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
    Also known as
    Ran1
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    Genomic context

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    See LOC110654066 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 4 NC_079496.1 (114494125..114496796)
    100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018745756.1 (1678780..1681439, complement)

    Chromosome 4 - NC_079496.1Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 7-2, mitochondrial-like Neighboring gene protein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 2-like Neighboring gene uncharacterized LOC110654065 Neighboring gene pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids. Li D, et al. Sci Rep, 2016 Apr 25. PMID 27108962, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal subunit export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GTP-binding nuclear protein Ran-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3005281v1 Primary Assembly

    Genomic

    1. NC_079496.1 Reference ASM3005281v1 Primary Assembly

      Range
      114494125..114496796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021809939.2 → XP_021665631.1  GTP-binding nuclear protein Ran-3 isoform X2

      UniProtKB/TrEMBL
      A0A023HJ65
      Conserved Domains (1) summary
      PLN03071
      Location:1 → 218
      PLN03071; GTP-binding nuclear protein Ran; Provisional

    2. XM_021809938.2 → XP_021665630.2  GTP-binding nuclear protein Ran-3 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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