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    LOC110643647 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [ Hevea brasiliensis (rubber tree) ]

    Gene ID: 110643647, updated on 2-Nov-2023

    Summary

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    Gene symbol
    LOC110643647
    Gene description
    1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1
    Locus tag
    P3X46_005781
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hevea brasiliensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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    Genomic context

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    See LOC110643647 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_06 current ASM3005281v1 (GCF_030052815.1) 4 NC_079496.1 (160063..179609)
    100 previous assembly ASM165405v1 (GCF_001654055.1) Unplaced Scaffold NW_018746817.1 (152005..157269)

    Chromosome 4 - NC_079496.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like Neighboring gene uncharacterized LOC110643653 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC110643658 Neighboring gene guanosine deaminase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phylloquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030052815.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3005281v1 Primary Assembly

    Genomic

    1. NC_079496.1 Reference ASM3005281v1 Primary Assembly

      Range
      160063..179609
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021796105.2 → XP_021651797.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 isoform X4

      Conserved Domains (1) summary
      cl00509
      Location:3 → 153
      hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...

    2. XM_021796106.2 → XP_021651798.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 isoform X5

      Conserved Domains (1) summary
      cl00509
      Location:3 → 105
      hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...

    3. XM_058144825.1 → XP_058000808.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 isoform X1

    4. XM_058144826.1 → XP_058000809.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 isoform X2

    5. XM_058144827.1 → XP_058000810.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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