U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC110600743 conserved oligomeric Golgi complex subunit 5 [ Manihot esculenta (cassava) ]

    Gene ID: 110600743, updated on 30-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC110600743
    Gene description
    conserved oligomeric Golgi complex subunit 5
    Locus tag
    MANES_01G130300v8
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Manihot esculenta
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC110600743 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current M.esculenta_v8 (GCF_001659605.2) 1 NC_035161.2 (32377282..32382813)
    100 previous assembly Manihot esculenta v6 (GCF_001659605.1) LG1 NC_035161.1 (24571834..24577383)

    Chromosome 1 - NC_035161.2Genomic Context describing neighboring genes Neighboring gene two-pore potassium channel 3 Neighboring gene uncharacterized LOC110600676 Neighboring gene AT-hook motif nuclear-localized protein 16 Neighboring gene GDSL esterase/lipase At4g10955 Neighboring gene 3-hydroxyisobutyryl-CoA hydrolase-like protein 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Golgi transport complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    conserved oligomeric Golgi complex subunit 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Manihot esculenta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference M.esculenta_v8 Primary Assembly

    Genomic

    1. NC_035161.2 Reference M.esculenta_v8 Primary Assembly

      Range
      32377282..32382813
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021737606.2 → XP_021593298.1  conserved oligomeric Golgi complex subunit 5

      UniProtKB/TrEMBL
      A0A2C9WMN9
      Conserved Domains (1) summary
      pfam10392
      Location:90 → 188
      COG5; Golgi transport complex subunit 5
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases