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    LOC110380909 C-terminal-binding protein [ Helicoverpa armigera (cotton bollworm) ]

    Gene ID: 110380909, updated on 29-Mar-2024

    Summary

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    Gene symbol
    LOC110380909
    Gene description
    C-terminal-binding protein
    Locus tag
    B5X24_HaOG210119
    See related
    EnsemblRapid:LOC110380909
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Helicoverpa armigera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Heliothinae; Helicoverpa
    Also known as
    HaOG210119
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    Genomic context

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    See LOC110380909 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_03 current ASM3070526v1 (GCF_030705265.1) 21 NC_087140.1 (220043..302825, complement)
    101 previous assembly HaSCD2 (GCF_023701775.1) 26 NC_064801.1 (7657205..7759736, complement)

    Chromosome 21 - NC_087140.1Genomic Context describing neighboring genes Neighboring gene beta-alanyl-bioamine nonribosomal peptide synthetase ebony Neighboring gene cilia- and flagella-associated protein 58-like Neighboring gene E3 ubiquitin-protein transferase MAEA Neighboring gene zinc transporter ZIP13 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030705265.1-RS_2024_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070526v1 Primary Assembly

    Genomic

    1. NC_087140.1 Reference ASM3070526v1 Primary Assembly

      Range
      220043..302825 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064040171.1 → XP_063896241.1  C-terminal-binding protein isoform X2

    2. XM_064040169.1 → XP_063896239.1  C-terminal-binding protein isoform X1

    3. XM_064040170.1 → XP_063896240.1  C-terminal-binding protein isoform X1

    4. XM_049848975.2 → XP_049704932.1  C-terminal-binding protein isoform X1

      Related
      XP_049704932.1
    Nucleotide Protein
    Heading Accession and Version

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