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    LOC110285941 olfactory receptor 5A1 [ Mus caroli (Ryukyu mouse) ]

    Gene ID: 110285941, updated on 15-Mar-2024

    Summary

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    Gene symbol
    LOC110285941
    Gene description
    olfactory receptor 5A1
    See related
    Ensembl:MGP_CAROLIEiJ_G0022746
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus caroli
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Orthologs
    human mouse all
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    Genomic context

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    See LOC110285941 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 19 NC_034588.1 (9588522..9589557, complement)

    Chromosome 19 - NC_034588.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 4D11-like Neighboring gene olfactory receptor 4D6 Neighboring gene olfactory receptor 5AN1-like Neighboring gene oxysterol-binding protein-related protein 2 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_034588.1 Chromosome 19 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    olfactory receptor 5A1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAROLI_EIJ_v1.1 Primary Assembly

    Genomic

    1. NC_034588.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

      Range
      9588522..9589557 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021152415.1 → XP_021008074.1  olfactory receptor 5A1

      UniProtKB/TrEMBL
      A0A6P5P2Y8
      Related
      MGP_CAROLIEiJ_P0048260, MGP_CAROLIEiJ_T0048260.1
      Conserved Domains (1) summary
      cd15417
      Location:28 → 306
      7tmA_OR5A1-like; olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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