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    UBXN2B UBX domain protein 2B [ Pogona vitticeps (central bearded dragon) ]

    Gene ID: 110088853, updated on 15-Mar-2024

    Summary

    Gene symbol
    UBXN2B
    Gene description
    UBX domain protein 2B
    See related
    Ensembl:ENSPVIG00000011381
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pogona vitticeps
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Acrodonta; Agamidae; Amphibolurinae; Pogona
    Orthologs
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    Genomic context

    See UBXN2B in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current pvi1.1 (GCF_900067755.1) Unplaced Scaffold NW_018150711.1 (552053..597431)

    NW_018150711.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110089753 Neighboring gene family with sequence similarity 110 member B Neighboring gene V-type proton ATPase subunit e 1 pseudogene Neighboring gene cholesterol 7-alpha-monooxygenase Neighboring gene syndecan binding protein Neighboring gene neutral sphingomyelinase activation associated factor

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_018150711.1 Unplaced Scaffold Reference pvi1.1

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in membrane fusion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in nuclear membrane reassembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    UBX domain-containing protein 2B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Pogona vitticeps Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pvi1.1

    Genomic

    1. NW_018150711.1 Reference pvi1.1

      Range
      552053..597431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020811465.1XP_020667124.1  UBX domain-containing protein 2B isoform X2

      UniProtKB/TrEMBL
      A0A6J0V940
      Conserved Domains (2) summary
      smart00553
      Location:171263
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cl00155
      Location:286309
      UBQ; Ubiquitin-like proteins
    2. XM_020811473.1XP_020667132.1  UBX domain-containing protein 2B isoform X3

      UniProtKB/TrEMBL
      A0A6J0V2M1
      Conserved Domains (2) summary
      smart00553
      Location:171263
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
      cl00155
      Location:286310
      UBQ; Ubiquitin-like proteins
    3. XM_020811453.1XP_020667112.1  UBX domain-containing protein 2B isoform X1

      UniProtKB/TrEMBL
      A0A6J0V2K4
      Related
      ENSPVIP00000014752.1, ENSPVIT00000018454.1
      Conserved Domains (2) summary
      cd01770
      Location:286362
      p47_UBX; p47-like ubiquitin domain
      smart00553
      Location:171263
      SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47

    RNA

    1. XR_002302149.1 RNA Sequence

    2. XR_002302146.1 RNA Sequence