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    LOC109854824 kaptin-like [ Pseudomyrmex gracilis ]

    Gene ID: 109854824, updated on 1-Oct-2024

    Summary

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    Gene symbol
    LOC109854824
    Gene description
    kaptin-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pseudomyrmex gracilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Pseudomyrmecinae; Pseudomyrmex
    Orthologs
    honey bee all
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    Genomic context

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    See LOC109854824 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current ASM200609v1 (GCF_002006095.1) Unplaced Scaffold NW_018020658.1 (163137..165395, complement)

    NW_018020658.1Genomic Context describing neighboring genes Neighboring gene calmodulin Neighboring gene tetratricopeptide repeat domain 7 Neighboring gene annexin B9 Neighboring gene uncharacterized LOC109854899

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_018020658.1 Unplaced Scaffold Reference ASM200609v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to amino acid starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of TORC1 signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of KICSTOR complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kaptin-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pseudomyrmex gracilis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200609v1

    Genomic

    1. NW_018020658.1 Reference ASM200609v1

      Range
      163137..165395 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020428311.1 → XP_020283900.1  kaptin-like

      Conserved Domains (1) summary
      pfam13517
      Location:322 → 380
      VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

    2. XM_020428310.1 → XP_020283899.1  kaptin-like

      Conserved Domains (1) summary
      pfam13517
      Location:322 → 380
      VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases