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    LOC109821481 dihydroneopterin aldolase 1-like [ Asparagus officinalis (garden asparagus) ]

    Gene ID: 109821481, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC109821481
    Gene description
    dihydroneopterin aldolase 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Asparagus officinalis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Asparagales; Asparagaceae; Asparagoideae; Asparagus
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC109821481 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Aspof.V1 (GCF_001876935.1) 8 NC_033801.1 (87854516..87864419)

    Chromosome 8 - NC_033801.1Genomic Context describing neighboring genes Neighboring gene annexin-like protein RJ4 Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene uncharacterized LOC109821485 Neighboring gene ALA-interacting subunit 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_033801.1 Chromosome 8 Reference Aspof.V1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dihydroneopterin aldolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in folic acid-containing compound metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dihydroneopterin aldolase 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Asparagus officinalis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Aspof.V1

    Genomic

    1. NC_033801.1 Reference Aspof.V1

      Range
      87854516..87864419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020387668.1 → XP_020243257.1  dihydroneopterin aldolase 1-like

      Conserved Domains (1) summary
      pfam02152
      Location:14 → 123
      FolB; Dihydroneopterin aldolase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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