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    LOC109798022 glycosyltransferase BC10 [ Cajanus cajan (pigeon pea) ]

    Gene ID: 109798022, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC109798022
    Gene description
    glycosyltransferase BC10
    Locus tag
    KK1_008917
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cajanus cajan
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus
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    Genomic context

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    See LOC109798022 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current C.cajan_V1.0 (GCF_000340665.1) 3 NC_033806.1 (6331575..6336567)

    Chromosome 3 - NC_033806.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109795863 Neighboring gene zinc finger protein BRUTUS Neighboring gene protein SAR DEFICIENT 1 Neighboring gene TMV resistance protein N Neighboring gene LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_033806.1 Chromosome 3 Reference C.cajan_V1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycosyltransferase BC10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cajanus cajan Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.cajan_V1.0 Primary Assembly

    Genomic

    1. NC_033806.1 Reference C.cajan_V1.0 Primary Assembly

      Range
      6331575..6336567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020358211.2 → XP_020213800.1  glycosyltransferase BC10

      UniProtKB/TrEMBL
      A0A151TRW9
      Conserved Domains (1) summary
      pfam02485
      Location:190 → 417
      Branch; Core-2/I-Branching enzyme
    Nucleotide Protein
    Heading Accession and Version

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