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    LOC109761703 transcription factor TGAL5 [ Aegilops tauschii ]

    Gene ID: 109761703, updated on 6-Jun-2024

    Summary

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    Gene symbol
    LOC109761703
    Gene description
    transcription factor TGAL5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aegilops tauschii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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    Genomic context

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    See LOC109761703 in Genome Data Viewer
    Location:
    chromosome: 1D
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    102 current Aet v5.0 (GCF_002575655.2) 1D NC_053035.2 (378006063..378014605)
    101 previous assembly Aet v4.0 (GCF_002575655.1) 1D NC_053035.1 (378103799..378112361)

    Chromosome 1D - NC_053035.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109744122 Neighboring gene cell division protein FtsZ homolog 2-2, chloroplastic Neighboring gene nascent polypeptide-associated complex subunit alpha, muscle-specific form-like Neighboring gene protein TRANSPARENT TESTA 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions. Nishijima R, et al. Mol Genet Genomics, 2016 Aug. PMID 27142109

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor TGAL5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Aegilops tauschii Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Aet v5.0 Primary Assembly

    Genomic

    1. NC_053035.2 Reference Aet v5.0 Primary Assembly

      Range
      378006063..378014605
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020320529.3 → XP_020176118.1  transcription factor TGAL5 isoform X1

      UniProtKB/TrEMBL
      A0A452Z7V0
      Conserved Domains (3) summary
      cd14686
      Location:217 → 268
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:297 → 370
      DOG1; Seed dormancy control
      cl21462
      Location:216 → 268
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    2. XM_020320534.3 → XP_020176123.1  transcription factor TGAL5 isoform X5

      UniProtKB/TrEMBL
      A0A452Z7V1
      Conserved Domains (3) summary
      cd14686
      Location:136 → 187
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:216 → 289
      DOG1; Seed dormancy control
      cl21462
      Location:135 → 187
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    3. XM_020320530.3 → XP_020176119.1  transcription factor TGAL5 isoform X2

      UniProtKB/TrEMBL
      A0A452Z7V0
      Conserved Domains (3) summary
      cd14686
      Location:216 → 267
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:296 → 369
      DOG1; Seed dormancy control
      cl21462
      Location:215 → 267
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    4. XM_020320535.3 → XP_020176124.1  transcription factor TGAL5 isoform X6

      UniProtKB/TrEMBL
      A0A452Z7V1
      Conserved Domains (3) summary
      cd14686
      Location:135 → 186
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:215 → 288
      DOG1; Seed dormancy control
      cl21462
      Location:134 → 186
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    5. XM_045227866.1 → XP_045083801.1  transcription factor TGAL5 isoform X1

      UniProtKB/TrEMBL
      A0A452Z7V0
      Conserved Domains (3) summary
      cd14686
      Location:217 → 268
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:297 → 370
      DOG1; Seed dormancy control
      cl21462
      Location:216 → 268
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    6. XM_020320528.3 → XP_020176117.1  transcription factor TGAL5 isoform X1

      UniProtKB/TrEMBL
      A0A452Z7V0
      Conserved Domains (3) summary
      cd14686
      Location:217 → 268
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:297 → 370
      DOG1; Seed dormancy control
      cl21462
      Location:216 → 268
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    7. XM_020320533.3 → XP_020176122.1  transcription factor TGAL5 isoform X5

      UniProtKB/TrEMBL
      A0A452Z7V1
      Conserved Domains (3) summary
      cd14686
      Location:136 → 187
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:216 → 289
      DOG1; Seed dormancy control
      cl21462
      Location:135 → 187
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    8. XM_020320532.3 → XP_020176121.1  transcription factor TGAL5 isoform X3

      UniProtKB/TrEMBL
      A0A452Z7V0
      Conserved Domains (3) summary
      cd14686
      Location:173 → 224
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:253 → 326
      DOG1; Seed dormancy control
      cl21462
      Location:172 → 224
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    9. XM_040387480.2 → XP_040243414.1  transcription factor TGAL5 isoform X4

      UniProtKB/TrEMBL
      A0A452Z7V0
      Conserved Domains (3) summary
      cd14686
      Location:172 → 223
      bZIP; coiled coil [structural motif]
      pfam14144
      Location:252 → 325
      DOG1; Seed dormancy control
      cl21462
      Location:171 → 223
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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