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    Lman2l lectin, mannose binding 2 like [ Castor canadensis (American beaver) ]

    Gene ID: 109687876, updated on 19-Jun-2024

    Summary

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    Gene symbol
    Lman2l
    Gene description
    lectin, mannose binding 2 like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Castor canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See Lman2l in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017870659.1 (175900..196816, complement)

    NW_017870659.1Genomic Context describing neighboring genes Neighboring gene cytosolic purine 5'-nucleotidase Neighboring gene metal transporter CNNM2-like Neighboring gene metal transporter CNNM4-like Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017870659.1 Unplaced Scaffold Reference C.can genome v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-mannose binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in COPII-coated ER to Golgi transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    VIP36-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.can genome v1.0

    Genomic

    1. NW_017870659.1 Reference C.can genome v1.0

      Range
      175900..196816 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020165979.1 → XP_020021568.1  VIP36-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8B7UPT0
      Conserved Domains (1) summary
      cl14058
      Location:49 → 297
      lectin_L-type; legume lectins

    2. XM_020165980.1 → XP_020021569.1  VIP36-like protein isoform X3

      UniProtKB/TrEMBL
      A0A8B7UTH9
      Conserved Domains (1) summary
      cl14058
      Location:24 → 153
      lectin_L-type; legume lectins

    3. XM_020165978.1 → XP_020021567.1  VIP36-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8B7UQJ4
      Conserved Domains (1) summary
      cl14058
      Location:49 → 308
      lectin_L-type; legume lectins

    4. XM_020165981.1 → XP_020021570.1  VIP36-like protein isoform X3

      UniProtKB/TrEMBL
      A0A8B7UTH9
      Conserved Domains (1) summary
      cl14058
      Location:24 → 153
      lectin_L-type; legume lectins
    Nucleotide Protein
    Heading Accession and Version

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