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    LOC109279885 VISTA enhancer mm17 [ Mus musculus (house mouse) ]

    Gene ID: 109279885, updated on 9-Aug-2024

    Summary

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    Gene symbol
    LOC109279885
    Gene description
    VISTA enhancer mm17
    Gene type
    biological region
    Feature type(s)
    regulatory: enhancer
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mm17; Rr1017
    Summary
    This locus represents a conserved genomic element that can function as an enhancer. It can activate a Hsp68 promoter coupled to a LacZ reporter gene in transgenic mice. [provided by RefSeq, Jun 2015]
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    Genomic context

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    See LOC109279885 in Genome Data Viewer
    Location:
    chromosome: 15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (99704957..99707575)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (99807076..99809694)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene ceramide synthase 5 Neighboring gene LIM domain and actin binding 1 Neighboring gene predicted gene, 25897 Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene predicted gene 17057 Neighboring gene STARR-seq mESC enhancer starr_39724

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • regulatory region 1017

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_054157.1 

      Range
      101..2719
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      99704957..99707575
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version