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    acsf3 acyl-CoA synthetase family member 3 [ Cyprinus carpio (common carp) ]

    Gene ID: 109099865, updated on 14-Mar-2024

    Summary

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    Gene symbol
    acsf3
    Gene description
    acyl-CoA synthetase family member 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinus carpio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
    Orthologs
    human zebrafish all
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    Genomic context

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    See acsf3 in Genome Data Viewer
    Location:
    chromosome: B7
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current ASM1834038v1 (GCF_018340385.1) B7 NC_056603.1 (36624739..36671307)
    100 previous assembly common carp genome (GCF_000951615.1) 24 NC_031720.1 (2717876..2738479)

    Chromosome B7 - NC_056603.1Genomic Context describing neighboring genes Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene uncharacterized LOC122138026 Neighboring gene cadherin 15, type 1, M-cadherin (myotubule) Neighboring gene SPG7 matrix AAA peptidase subunit, paraplegin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables medium-chain fatty acid-CoA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    malonate--CoA ligase ACSF3, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1834038v1 Primary Assembly

    Genomic

    1. NC_056603.1 Reference ASM1834038v1 Primary Assembly

      Range
      36624739..36671307
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042728490.1 → XP_042584424.1  malonate--CoA ligase ACSF3, mitochondrial

      UniProtKB/TrEMBL
      A0A8C1V0S8, A0A9Q9WK66
      Conserved Domains (1) summary
      cd05941
      Location:64 → 577
      MCS; Malonyl-CoA synthetase (MCS)

    2. XM_042728491.1 → XP_042584425.1  malonate--CoA ligase ACSF3, mitochondrial

      UniProtKB/TrEMBL
      A0A8C1V0S8, A0A9Q9WK66
      Conserved Domains (1) summary
      cd05941
      Location:64 → 577
      MCS; Malonyl-CoA synthetase (MCS)

    3. XM_042728489.1 → XP_042584423.1  malonate--CoA ligase ACSF3, mitochondrial

      UniProtKB/TrEMBL
      A0A8C1V0S8, A0A9Q9WK66
      Conserved Domains (1) summary
      cd05941
      Location:64 → 577
      MCS; Malonyl-CoA synthetase (MCS)

    4. XM_042728492.1 → XP_042584426.1  malonate--CoA ligase ACSF3, mitochondrial

      UniProtKB/TrEMBL
      A0A8C1V0S8, A0A9Q9WK66
      Conserved Domains (1) summary
      cd05941
      Location:64 → 577
      MCS; Malonyl-CoA synthetase (MCS)
    Nucleotide Protein
    Heading Accession and Version

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