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    LOC108949271 uncharacterized LOC108949271 [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 108949271, updated on 12-Aug-2022

    Summary

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    Gene symbol
    LOC108949271
    Gene description
    uncharacterized LOC108949271
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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    Genomic context

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    See LOC108949271 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current KH (GCF_000224145.3) 9 NC_020174.2 (3927977..3935687, complement)

    Chromosome 9 - NC_020174.2Genomic Context describing neighboring genes Neighboring gene carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 Neighboring gene uncharacterized LOC100184585 Neighboring gene uncharacterized LOC100182188 Neighboring gene uncharacterized LOC108949791

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_020174.2 Chromosome 9 Reference KH Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC108949271

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NC_020174.2 Reference KH Primary Assembly

      Range
      3927977..3935687 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026836183.1 → XP_026691984.1  uncharacterized protein LOC108949271 isoform X1

    2. XM_026836185.1 → XP_026691986.1  uncharacterized protein LOC108949271 isoform X3

      Conserved Domains (1) summary
      pfam07974
      Location:133 → 164
      EGF_2; EGF-like domain

    3. XM_026836190.1 → XP_026691991.1  uncharacterized protein LOC108949271 isoform X5

    4. XM_026836187.1 → XP_026691988.1  uncharacterized protein LOC108949271 isoform X5

    5. XM_026836189.1 → XP_026691990.1  uncharacterized protein LOC108949271 isoform X5

      Conserved Domains (1) summary
      pfam07974
      Location:43 → 74
      EGF_2; EGF-like domain

    6. XM_026836188.1 → XP_026691989.1  uncharacterized protein LOC108949271 isoform X5

    7. XM_026836184.1 → XP_026691985.1  uncharacterized protein LOC108949271 isoform X2

      UniProtKB/TrEMBL
      H2Y159
      Conserved Domains (1) summary
      pfam07974
      Location:137 → 168
      EGF_2; EGF-like domain

    8. XM_026836186.1 → XP_026691987.1  uncharacterized protein LOC108949271 isoform X4

      Conserved Domains (1) summary
      pfam07974
      Location:92 → 123
      EGF_2; EGF-like domain
    Nucleotide Protein
    Heading Accession and Version

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