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    eef1d eukaryotic translation elongation factor 1 delta [ Scleropages formosus (Asian bonytongue) ]

    Gene ID: 108930975, updated on 22-Oct-2023

    Summary

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    Gene symbol
    eef1d
    Gene description
    eukaryotic translation elongation factor 1 delta
    See related
    Ensembl:ENSSFOG00015006740
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scleropages formosus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
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    Genomic context

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    See eef1d in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current fSclFor1.1 (GCF_900964775.1) 1 NC_041806.1 (25394354..25407164)
    100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017371668.1 (89308..102112, complement)

    Chromosome 1 - NC_041806.1Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 39-like Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene transfer RNA leucine (anticodon UAA) Neighboring gene protein THEM6-like Neighboring gene protein THEM6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of eukaryotic translation elongation factor 1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation factor 1-delta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSclFor1.1 Primary Assembly

    Genomic

    1. NC_041806.1 Reference fSclFor1.1 Primary Assembly

      Range
      25394354..25407164
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018746493.2 → XP_018602009.1  elongation factor 1-delta isoform X5

      UniProtKB/TrEMBL
      A0A8C9RAH8

    2. XM_018746497.2 → XP_018602013.1  elongation factor 1-delta isoform X7

      UniProtKB/TrEMBL
      A0A8C9RAH8

    3. XM_018746490.2 → XP_018602006.2  elongation factor 1-delta isoform X2

      UniProtKB/TrEMBL
      A0A0P7VD58, A0A8C9RCV8
      Related
      ENSSFOP00015010390.2, ENSSFOT00015010531.2
      Conserved Domains (2) summary
      pfam10587
      Location:502 → 526
      EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
      pfam00736
      Location:538 → 621
      EF1_GNE; EF-1 guanine nucleotide exchange domain

    4. XM_018746489.2 → XP_018602005.2  elongation factor 1-delta isoform X1

      UniProtKB/TrEMBL
      A0A0P7VD58
      Conserved Domains (2) summary
      pfam10587
      Location:531 → 555
      EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
      pfam00736
      Location:567 → 650
      EF1_GNE; EF-1 guanine nucleotide exchange domain

    5. XM_018746494.2 → XP_018602010.1  elongation factor 1-delta isoform X5

      UniProtKB/TrEMBL
      A0A8C9RAH8

    6. XM_018746495.2 → XP_018602011.1  elongation factor 1-delta isoform X6

      UniProtKB/TrEMBL
      A0A8C9RAH8
      Related
      ENSSFOP00015010373.1, ENSSFOT00015010514.2

    7. XM_018746491.2 → XP_018602007.2  elongation factor 1-delta isoform X3

      UniProtKB/TrEMBL
      A0A0P7VD58, A0A8C9R7V1
      Related
      ENSSFOP00015010441.2, ENSSFOT00015010583.2
      Conserved Domains (3) summary
      pfam10587
      Location:481 → 505
      EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
      pfam15799
      Location:359 → 444
      CCD48; Coiled-coil domain-containing protein 48
      pfam00736
      Location:517 → 600
      EF1_GNE; EF-1 guanine nucleotide exchange domain

    8. XM_018746492.2 → XP_018602008.2  elongation factor 1-delta isoform X4

      UniProtKB/TrEMBL
      A0A0P7VD58
      Conserved Domains (3) summary
      pfam10587
      Location:457 → 481
      EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
      pfam15799
      Location:367 → 420
      CCD48; Coiled-coil domain-containing protein 48
      pfam00736
      Location:493 → 576
      EF1_GNE; EF-1 guanine nucleotide exchange domain
    Nucleotide Protein
    Heading Accession and Version

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